O2k-Publications: Topics
- Mitochondria and cell research
Mitochondrial physiology: MiP areas
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
mt-Medicine (363 entries)
363
516
2
Exercise physiology;nutrition;life style
756
1050
3
Comparative MiP;environmental MiP
325
477
4
Pharmacology;toxicology
844
1041
5
mt-Biogenesis;mt-density
248
331
6
Genetic knockout;overexpression
655
725
7
Instruments;methods
273
416
Pathological states
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Aging;senescence
275
417
2
Alzheimer's
71
94
3
Autism
7
11
4
Cancer
356
514
5
Cardiovascular
207
289
6
COPD
10
13
7
Diabetes
350
468
8
Inherited
64
99
9
Infectious
50
69
10
Myopathy
77
89
11
Neurodegenerative
169
235
12
Obesity
255
423
13
Parkinson's
68
105
14
Sepsis
74
85
15
Other
292
364
Stress conditions
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Cell death
White, brown, beige fat tissue
93
156
2
Cryopreservation
41
67
3
Hypoxia
117
229
4
Ischemia-reperfusion
327
434
5
Mitochondrial disease
150
211
6
Oxidative stress;RONS
583
841
7
Permeability transition
71
96
8
Temperature: hypothermia; hyperthermia]
92
113
Organisms
- Mammals
- Model organisms
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Chicken
(Β» Birds)
5
7
2
Zebrafish
(Β» Fishes)
16
23
3
Drosophila
(Β» Hexapods)
65
91
4
Caenorhabditis elegans
(Β» Nematodes)
24
33
5
Artemia
(Β» Crustaceans)
12
19
6
Saccharomyces cerevisiae
(Β» Fungi)
61
88
7
Comparative MiP
325
477
- Non-mammals
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Birds
(Β» Chicken)
15
27
2
Reptiles
turtles, lizards, snakes, crocodiles, alligators
13
18
3
Amphibians
frogs, toads, salamanders
10
15
4
Fishes
bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); Β» Zebrafish
116
153
5
Hexapods
insects, springtails; Β» Drosophila
34
43
6
Crustaceans
crabs, shrimp, barnacles, etc.; Β» Artemia
19
40
7
Annelids
polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches
3
20
8
Molluscs
gastropods, cephalopods, bivalves
25
42
9
Nematodes
Β» Caenorhabditis elegans
5
11
10
Other invertebrates
urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ...
11
21
11
Fungi
yeast, molds, mushrooms, etc.; Β» Saccharomyces cerevisiae
52
63
12
Plants
29
58
13
Protists
amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc.
43
60
14
Eubacteria
true bacteria, cyanobacteria, spirochetes
25
51
15
Archaea
archaebacteria
0
7
Tissues and cells
- Tissues - alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Fat
White, brown, beige fat tissue
188
263
2
Genital
92
123
3
Heart
724
936
4
Kidney
150
183
5
Liver
646
841
6
Lung;Gill
59
82
7
Nervous system
606
732
8
Skeletal muscle
1106
1370
- Cell types - alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Blood cells
254
320
2
Endothelial;epithelial;mesothelial cell
259
294
3
Fibroblast
207
271
4
Islet cell;pancreas;thymus
55
67
5
Lymphocyte
58
76
6
Platelet
121
151
7
Stem cells
36
48
- Cell lines - alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
CHO
14
16
2
HEK
95
116
3
HeLa
38
55
4
Neuroblastoma
43
50
5
HUVEC
19
22
6
Macrophage-derived cell lines
26
37
7
Other cells and cell lines
292
338
Preparations
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Intact organism
53
248
2
Intact organ
23
38
3
Intact cells
1165
1314
4
Permeabilized cells
716
754
5
Permeabilized tissue
1115
1209
6
Homogenate
376
420
7
Isolated mitochondria
1264
1571
8
SMP
Submitochondrial particles
10
28
9
Chloroplasts
2
10
10
Enzyme
39
102
11
Oxidase and biochemical oxidation
39
49
Enzymes
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Adenine nucleotide translocase
ANT
21
27
2
Complex I
CI
461
607
3
Complex II;succinate dehydrogenase
CII
412
639
4
Complex III
CIII
301
363
5
Complex IV;cytochrome c oxidase
CIV
408
499
6
Complex V;ATP synthase
CV
220
267
7
Inner mt-membrane transporter
31
44
8
Marker enzyme
58
84
9
Supercomplex
49
78
10
TCA cycle and matrix dehydrogenases
Tricarboxylic acid cycle
82
109
11
Uncoupling protein
60
66
Regulation
- Alphabetical order
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
ADP
ADP kinetics
152
207
2
ATP production
78
123
3
Aerobic glycolysis
49
94
4
Amino acid
9
20
5
Calcium
106
179
6
Coupling efficiency;uncoupling
82
163
7
Cyt c
Cytochrome c
42
56
8
Fatty acid
FA substrate kinetics
127
159
9
Flux control
54
86
10
Inhibitor
Inhibitor kinetics
131
169
11
Ion;substrate transport
65
116
12
mt-Membrane potential
118
181
13
Oxygen kinetics
107
148
14
Q-junction effect
13
56
15
Redox state
58
98
16
Substrate
Fuel substrate kinetics
181
236
17
Temperature
Temperature dependence
73
100
18
Threshold;excess capacity
27
30
19
Uncoupler
Uncoupler kinetics
55
70
Coupling control states
#
O2k-Publications
MitoPedia: Coupling control states
Comment
O2k
Total
1
P
OXPHOS capacity
Oxidative phosphorylation capacity, saturating [ADP]
2867
3096
2
R
ROUTINE respiration
Physiological state, intact cells
894
981
3
E
Electron transfer system capacity
Maximal noncoupled respiration
0
0
4
L
LEAK respiration
Resting state, non-phosphorylating respiration
2613
2772
Pathway control states
#
O2k-Publications
MitoPedia: Pathway control states
Comment
O2k
Total
1
F
F-pathway control state
Fatty acid oxidation, level 5
609
753
2
N
N-pathway control state
NADH-linked, level 4
2475
2623
3
S
S-pathway control state
Succinate-linked, level 3
1686
1794
4
Gp
Gp-pathway control state
Glycerophosphate-linked, level 3
157
183
5
DQ
Duorquinol-linked, level 2
26
31
6
CIV
Complex IV single step
Ascorbate & TMPD, level 1
702
730
7
NS
NS-pathway control state
Convergent CI- and CII-linked electron flow to the Q-junction
1580
1637
8
Other
133
149
9
ROX
Residual oxygen consumption
includes non-mitochondrial respiration
1521
1573
MiPMap combinations - examples
- Examples for specific combinations
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
O2k-Publications: Human skeletal muscle
1106
1370
2
O2k-Publications: Human heart
724
936
3
O2k-Publications: Skeletal muscle - human vs mouse
40
49
- Browse data
O2k-Manuals and protocols and specific instrumental applications
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Oxygraph-2k
4710
4710
2
TIP2k
44
44
3
O2k-Fluorometry
351
357
4
O2k-pH ISE-Module
4
5
5
Nitric Oxide
8
8
6
TPP + ISE-Module
54
58
7
Calcium
11
11
8
O2k- Spectrophotometer
8
8
9
O2k-Manual
24
25
8
O2k-Protocol
71
93
9
Theoretical background
13
69
10
Instruments;methods
273
416
11
O2k-Fluorometry - Fluorophores
22
22
12
PBI Shredder
Homogenate preparation
20
22
#
O2k-Publications
MitoPedia:
Comment
O2k
Total
1
Twin-Flow respirometry
0
21
2
Separate DatLab applications
29
35