O2k-Publications: Topics

                

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O2k-Publications: Topics

Mitochondria and cell research

See also » O2k-Publications - chronological: 4710

Mitochondrial physiology: MiP areas

• mt-Medicine (363 entries)
• Exercise physiology;nutrition;life style •• Comparative MiP;environmental MiP
• Pharmacology;toxicology
• mt-Biogenesis;mt-density •• Genetic knockout;overexpression
• Instruments;methods

Pathological states

Alphabetical order

•• Aging;senescence •• Alzheimer's •• Autism •• Cancer •• Cardiovascular •• COPD •• Diabetes •• Inherited •• Infectious •• Myopathy •• Neurodegenerative •• Obesity •• Parkinson's •• Sepsis

• Other

Stress conditions

Alphabetical order

•• Cell death •• Cryopreservation •• Hypoxia •• Ischemia-reperfusion injury and preservation •• Mitochondrial disease;degenerative disease and defect •• Oxidative stress;RONS •• Permeability transition •• Temperature: hypothermia; hyperthermia

Organisms

Mammals

• Human
• Pig
• Horse
• Bovines
• Cat
• Dog
• Rabbit
• Mouse
• Rat
• Guinea pig
• Other mammals: including only mammals that are not listed as mammalian species above'.

Model organisms

• Chicken (» Birds)
• Zebrafish (» Fishes)
• Drosophila (» Hexapods)
• Caenorhabditis elegans (» Nematodes)
• Artemia (» Crustaceans)
• Saccharomyces cerevisiae (» Fungi)
• Comparative MiP

Non-mammals

• Birds (» Chicken)
• Reptiles - turtles, lizards, snakes, crocodiles, alligators
• Amphibians - frogs, toads, salamanders
• Fishes - bony fishes, carilaginous fishes (sharks, rays, skates) and jawless fishes (hagfish, lampreys); » Zebrafish
• Hexapods - insects, springtails; » Drosophila
• Crustaceans - crabs, shrimp, barnacles, etc.; » Artemia
• Annelids - polychaetes, e.g. lugworm Arenicola marina, oligochaetes, leeches
• Molluscs - gastropods, cephalopods, bivalves
• Nematodes » Caenorhabditis elegans
• Other invertebrates - urocordates (e.g. ascidians, sea squirts); cephalochordates (amphioxus, lancelets); echinoderms; chelicerates (e.g. spiders, scorpions, horseshoe crabs); myriapods (millipedes, centipedes); gastrotrichs; rotifers; ctenophores; nemerteans; tardigrades; platyhelminthes; cnidaria; porifera; ...
• Fungi - yeast, molds, mushrooms, etc.; » Saccharomyces cerevisiae
• Plants
• Protists - amoebas, ciliates, trypanosomes, dinoflagellates, diatoms, green algae, etc.
• Eubacteria - true bacteria, cyanobacteria, spirochetes
• Archaea - archaebacteria

Tissues and cells

Tissues - alphabetical order

•• Fat •• Genital •• Heart •• Kidney •• Liver •• Lung;Gill •• Nervous system •• Skeletal muscle

Cell types - alphabetical order

•• Blood cells •• Endothelial;epithelial;mesothelial cell •• Fibroblast •• Islet cell;pancreas;thymus •• Lymphocyte •• Platelet •• Stem cells

Cell lines - alphabetical order

•• CHO •• HEK •• HeLa •• Neuroblastoma •• HUVEC •• Macrophage-derived cell lines

• Other cells and cell lines

Preparations

• Intact organism •• Intact organ •• Intact cells •• Permeabilized cells •• Permeabilized tissue •• Homogenate •• Isolated mitochondria •• SMP •• Chloroplasts •• Enzyme •• Oxidase and biochemical oxidation

Enzymes

Alphabetical order

•• Adenine nucleotide translocase •• Complex I •• Complex II;succinate dehydrogenase •• Complex III •• Complex IV;cytochrome c oxidase •• Complex V;ATP synthase •• Inner mt-membrane transporter •• Marker enzyme •• Supercomplex •• TCA cycle and matrix dehydrogenases •• Uncoupling protein

Regulation

Alphabetical order

•• ADP •• ATP production •• Aerobic glycolysis •• Amino acid •• Calcium •• Coupling efficiency;uncoupling •• Cyt c •• Fatty acid •• Flux control •• Inhibitor •• Ion;substrate transport •• mt-Membrane potential •• Oxygen kinetics •• Q-junction effect •• Redox state •• Substrate •• Temperature •• Threshold;excess capacity •• Uncoupler

Coupling control states

•• OXPHOS •• ROUTINE •• ETS •• LEAK

Pathway control states

#	O2k-Publications	Number	MitoPedia: Pathway control states	Number	Comment
1	F	609	F-pathway control state	753	Fatty acid oxidation, level 5
2	N	2475	N-pathway control state	2623	NADH-linked, level 4
3	S	1686	S-pathway control state	1794	Succinate-linked, level 3
4	Gp	157	Gp-pathway control state	183	Glycerophosphate-linked, level 3
5	DQ	26	DQ-pathway control state	31	Duorquinol-linked, level 2
6	CIV	702	Complex IV single step	730	Ascorbate & TMPD, level 1
7	NS	1580	NS-pathway control state	1637	Convergent CI- and CII-linked electron flow to the Q-junction
8	Other combinations	133	Other combinations-pathway control state	149
9	ROX	1521	Residual oxygen consumption	1573	Residual oxygen consumption

MiPMap combinations - examples

Examples for specific combinations

• O2k-Publications: Human skeletal muscle •• O2k-Publications: Human heart •• O2k-Publications: Skeletal muscle - human vs mouse

Browse data

• Browse O2k-Publications

O2k-Manuals and protocols and specific instrumental applications

• O2k-Manual •• Instruments;methods •• TIP2k •• O2k-Fluorometry•• O2k-Fluorometry - Fluorophores•• TPP + ISE-Module •• O2k-pH ISE-Module •• Theoretical background •• O2k-Protocols •• PBI Shredder

• Twin-Flow respirometry •• Separate DatLab applications