Cookies help us deliver our services. By using our services, you agree to our use of cookies. More information

Difference between revisions of "Talk:SUIT protocol library"

From Bioblast
Β 
(10 intermediate revisions by 2 users not shown)
Line 1: Line 1:
== Future Projects/Protocols ==
[[Image:BB-Bioblast.jpg|left|40px|link=http://www.bioblast.at/index.php/Bioblast:About|Bioblast wiki]]
== Popular Bioblast page ==
::: [[SUIT protocol library]] has been accessed more than
::::*Β  5,000 times (2016-09-28)


__TOC__
* This former page has been moved to http://intern.oroboros.at/index.php/SUIT_protocol_library_intern


== Fish - Oxidative stress ==
== Subcategories of SUIT protocols - previous concept ==
:Β» [[Categories of SUIT protocols]]


* Protocol 1: G + M + D + H202 (wait 20 min) + Ctl + c + P + D + S + Omy + FCCP+ Rot + Mna + Ama
'''A. CI-CII-CIV''' - New: NSTm
* Protocol 2: G + M + D + H202 (wait 20 min) + Ctl + c + P + D + S * Rot + Omy + FCCP + + Rot + Mna + Ama
# CI + CII Β» New: NS
# CI + CII + CIV (??)
# CI + CI<small>&</small>II + CII Β» New: N+NS
# CI + CI<small>&</small>II + CII + CIV Β» New: N+NS+S+Tm


: see the following protocol for the H202 - oxidative stressΒ  - treatment: [[DSL_intern#Protocol:_2011-10-06]]
'''B. FAO-CI-CII-CGpDH-CIV'''
: '''Rational:''' calculation of P/E is not possible, but the effect of Omy is of interest
# FAO + CI<small>&</small>FAO + CII + CGpDH
# FAO + CI<small>&</small>FAO + CII + CGpDH + CIV
# FAO + CI<small>&</small>FAO + CI<small>&</small>II<small>&</small>FAO + CII + CGpDH
# FAO + CI<small>&</small>FAO + CI<small>&</small>II<small>&</small>FAO + CII + CGpDH + CIV


'''C. FAO-CI-CII-CIV'''
# FAO + CI<small>&</small>FAO + CII
# FAO + CI<small>&</small>FAO + CII + CIV
# FAO + CI<small>&</small>FAO + CI<small>&</small>II<small>&</small>FAO + CII
# FAO + CI<small>&</small>FAO + CI<small>&</small>II<small>&</small>FAO + CII + CIV


'''D. CGpDH-CI-CII-CIV'''
# CGpDH + CI<small>&</small>GpDH
# CGpDH + CI<small>&</small>GpDH + CII<small>&</small>GpDH
# CGpDH + CI<small>&</small>GpDH + CII<small>&</small>GpDH + CIV
# CGpDH + CI<small>&</small>GpDH + CI<small>&</small>II<small>&</small>GpDH + CII<small>&</small>GpDH
# CGpDH + CI<small>&</small>GpDH + CI<small>&</small>II<small>&</small>GpDH + CII<small>&</small>GpDH + CIV
# CI + CI<small>&</small>GpDH + ...
# CI + CI<small>&</small>II + CI<small>&</small>II<small>&</small>GpDH + ...
# CI<small>&</small>II + CI<small>&</small>II<small>&</small>GpDH + ...


== Mouse brain - Shredder ==
'''E. FAO-CGpDH-CI-CII-CIV'''
Β 
# FAO + FAO<small>&</small>GpDH + CI<small>&</small>FAO<small>&</small>GpDH + ...
* Idea by Erich, 2011-10-07
# CGpDH + FAO<small>&</small>GpDH + CI<small>&</small>FAO<small>&</small>GpDH + ...
Β 
# FAO + FAO<small>&</small>GpDH + CI<small>&</small>II<small>&</small>FAO + CI<small>&</small>II<small>&</small>FAO<small>&</small>GpDH + ...
* Method: Shredder
# CGpDH + FAO<small>&</small>GpDH + CI<small>&</small>FAO<small>&</small>GpDH + ...
Β 
# CI + CI<small>&</small>II + CI<small>&</small>II<small>&</small>GpDH + CI<small>&</small>II<small>&</small>FAO<small>&</small>GpDH + ...
* Rational: test these different protocols to see the effect of cytochrome c and Oligomycin at different positions in the protocol
# ...
Β 
Β 
* Protocol 1: PGM + '''c + D-titration + Omy''' + F-titration + Rot + Mna + Ama
* Protocol 2: PGM + '''D-titration + c + Omy''' + F-titration + Rot + Mna + Ama
* Protocol 3: PGM + '''D-titration + Omy + c''' + F-titration + Rot + Mna + Ama

Latest revision as of 17:02, 28 September 2016

Bioblast wiki

Popular Bioblast page

SUIT protocol library has been accessed more than
  • 5,000 times (2016-09-28)

Subcategories of SUIT protocols - previous concept

Β» Categories of SUIT protocols

A. CI-CII-CIV - New: NSTm

  1. CI + CII Β» New: NS
  2. CI + CII + CIV (??)
  3. CI + CI&II + CII Β» New: N+NS
  4. CI + CI&II + CII + CIV Β» New: N+NS+S+Tm

B. FAO-CI-CII-CGpDH-CIV

  1. FAO + CI&FAO + CII + CGpDH
  2. FAO + CI&FAO + CII + CGpDH + CIV
  3. FAO + CI&FAO + CI&II&FAO + CII + CGpDH
  4. FAO + CI&FAO + CI&II&FAO + CII + CGpDH + CIV

C. FAO-CI-CII-CIV

  1. FAO + CI&FAO + CII
  2. FAO + CI&FAO + CII + CIV
  3. FAO + CI&FAO + CI&II&FAO + CII
  4. FAO + CI&FAO + CI&II&FAO + CII + CIV

D. CGpDH-CI-CII-CIV

  1. CGpDH + CI&GpDH
  2. CGpDH + CI&GpDH + CII&GpDH
  3. CGpDH + CI&GpDH + CII&GpDH + CIV
  4. CGpDH + CI&GpDH + CI&II&GpDH + CII&GpDH
  5. CGpDH + CI&GpDH + CI&II&GpDH + CII&GpDH + CIV
  6. CI + CI&GpDH + ...
  7. CI + CI&II + CI&II&GpDH + ...
  8. CI&II + CI&II&GpDH + ...

E. FAO-CGpDH-CI-CII-CIV

  1. FAO + FAO&GpDH + CI&FAO&GpDH + ...
  2. CGpDH + FAO&GpDH + CI&FAO&GpDH + ...
  3. FAO + FAO&GpDH + CI&II&FAO + CI&II&FAO&GpDH + ...
  4. CGpDH + FAO&GpDH + CI&FAO&GpDH + ...
  5. CI + CI&II + CI&II&GpDH + CI&II&FAO&GpDH + ...
  6. ...