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Difference between revisions of "NextGen-O2k Scientific developments"

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::::* Data handling and quality control
::::* Data handling and quality control


== Achievements ==


::::'''Project Year 1:'''Β  During testing in the first project year, optimal measurement conditions were determined for using the Q-sensor with a variety of biological samples. Simultaneously testing began of the beta version of DatLab. New SUIT protocols were developed for general, pre-clinical, and algal biotechnology applications. A focus has also been given to internal and external quality control measures.
::::'''Project Year 2:''' During the second project year, measurement conditions and protocols were optimized for the PB- and Q-Modules with a variety of biological samples. Additionally, the NADH-Module for evaluation of the NADH-pool in physio-pathological conditions was integrated in the NextGen-O2k. Testing of modules for the DatLab8 software were conducted and improvements applied. Moreover, SUIT protocols for general, pre-clinical, and algal biotechnology applications were developed. Quality control was maintained during the second period of project, an important factor in the development of the NexGen-O2k instrument and relevant protocols.


== Progress and next steps ==
== Progress and next steps ==
:::: '''2020-03-31:''' First beta version of the software DatLab 8 delivered by our collaborator HTech. Start of testing in-house.
:::: '''2020-02-20:''' Start of development of protocols for the PB-Module, including new [[SUIT]] protocols for photosynthesis measurements.


:::: '''2019-12-31:''' Determination of optimal Q-sensor measurement conditions in different biological samples (brain and heart isolated mitochondria from mouse, yeast)
See Β» [[Talk:NextGen-O2k Scientific developments|Track record]]
:::: '''2019-10-22:'''Β  66 SUIT protocols optimized and released with DatLab 7.4, see [[MitoPedia:_SUIT]]
<br/>
<gallery mode=default perrow=4 widths="350px" heights="300px">
File:Luiza Q-module testing and DatLab8.jpg|[[Cardoso Luiza HD|Luiza Cardoza, PhD.]] testing the Q-Module and DatLab8
File:Microalgae for testing PB module.jpg|Microalgae for testing PB module
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== NextGen-O2k MitoFit Preprints ==
{{#ask:[[Instrument and method::NextGen-O2k]] [[Was published in journal::MitoFit Preprint Arch]]
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== Links and references ==
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Latest revision as of 13:23, 3 April 2022

Bioblast 2022



NextGen-O2k Scientific developments

NextGen-O2k

The revolutionary all-in-one instrument to conquer mitochondrial disease.


WP2: Scientific developments



Abstract

The aim of this workpackage is to test measurement conditions for the newly developed modules and the development of specific applications.
  • Determination of optimal Q-sensor measurement conditions
  • Determination of optimal measurement conditions for the PB-Module
  • Development of protocols for scientific, pre-clinical and algal biotechnology applications
  • Data handling and quality control

Achievements

Project Year 1: During testing in the first project year, optimal measurement conditions were determined for using the Q-sensor with a variety of biological samples. Simultaneously testing began of the beta version of DatLab. New SUIT protocols were developed for general, pre-clinical, and algal biotechnology applications. A focus has also been given to internal and external quality control measures.
Project Year 2: During the second project year, measurement conditions and protocols were optimized for the PB- and Q-Modules with a variety of biological samples. Additionally, the NADH-Module for evaluation of the NADH-pool in physio-pathological conditions was integrated in the NextGen-O2k. Testing of modules for the DatLab8 software were conducted and improvements applied. Moreover, SUIT protocols for general, pre-clinical, and algal biotechnology applications were developed. Quality control was maintained during the second period of project, an important factor in the development of the NexGen-O2k instrument and relevant protocols.

Progress and next steps

See Β» Track record

NextGen-O2k MitoFit Preprints

LinkViewReferenceYear
MitoFit Preprints 2023.2.
MitoFit pdf
Functional hypoxia reduces mitochondrial calcium uptake.
Donnelly C, KomlΓ³di T, Cecatto C, Cardoso LHD, Compagnion AC, Matera A, Tavernari D, Zanou N, Kayser B, Gnaiger E, Place N (2023) Functional hypoxia reduces mitochondrial calcium uptake. MitoFit Preprints 2023.2. https://doi.org/10.26124/mitofit:2023-0002 β€” 2024-11-17 published in Redox Biol.2023
MitoFit Preprints 2021.05.
MitoFit pdf


Went N, Di Marcello M, Gnaiger E (2021) Oxygen dependence of photosynthesis and light-enhanced dark respiration studied by High-Resolution PhotoRespirometry. MitoFit Preprints 2021.05. https://doi.org/10.26124/mitofit:2021-00052021
MitoFit Preprint Arch EA20.1.
MitoFit pdf
High-resolution respirometry for chloroplast and mitochondrial bioenergetics in Chlamydomonas reinhardtii ― towards biotechnology exploitations
Huete-Ortega M, Di Marcello M, Iglesias-Gonzalez J, Gnaiger E (2020) High-resolution respirometry for chloroplast and mitochondrial bioenergetics in Chlamydomonas reinhardtii ― towards biotechnology exploitations. https://doi.org/10.26124/mitofit:ea20.algaeurope.00012020