Difference between revisions of "MitoEAGLE data: blood and cultured cells"
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::::# Application of SOPs in experimental studies during Short Term Scientific Missions and feeding of data into the MITOEAGLE data repository. | ::::# Application of SOPs in experimental studies during Short Term Scientific Missions and feeding of data into the MITOEAGLE data repository. | ||
::::# Publication of SOPs and study results. | ::::# Publication of SOPs and study results. | ||
=== Milestones === | === Milestones === | ||
Line 46: | Line 47: | ||
::::# MITOEAGLE data repository for comparative data evaluation, planning of future studies, data mining. | ::::# MITOEAGLE data repository for comparative data evaluation, planning of future studies, data mining. | ||
::::# Publication with a set of reference data. | ::::# Publication with a set of reference data. | ||
== Feedback WG4 == | |||
::::# ''Dr. Ali will work within the realms of WG4 (blood and cultured cells) and potentially WG1 (protocol development) as well as WG5 (dissemination and training). He will participate in data generation, quality control, and repository efforts of protocols recommended by these working groups. Dr. Ali will contribute to training workshops and conferences that aim at defining standard procedures and terminology in the field of mitochondria physiology.'' - '''[[Ali SS |Sameh S Ali]]''' (2016). | |||
::::# ''I am very interested in being part of the management committee either as a MC member for managment tasks or in working group 4 MITOEAGLE data repository for blood cells and cultured cells. I have experience in analyzing mitochondrial function in different human tissues as cultured cells and blood cells (also subsets of specific blood populations, see list of publications), muscle and isolated mitochondria. This together with my experience in organizing summer schools and conferences could be helpful as MC member taking care of management tasks. However, if you think my expertise is more helpful in working group 4, I am looking forward to support this working group.'' - [[Renner-Sattler K|Kathrin Renner-Sattler]] (2016). | |||
Revision as of 15:16, 2 May 2016
News and Events | Working Groups | Short-Term Scientific Missions | Management Committee | Members |
COST Action CA15203 (2016-2021): MitoEAGLE
Evolution-Age-Gender-Lifestyle-Environment: mitochondrial fitness mapping
MitoEAGLE data: blood and cultured cells
WG4
- MITOEAGLE data repository for blood cells and clutured cells
WG4 Description
- Biopsy sampling of human muscle and fat tissue for mitochondrial studies is an invasive approach. More recently measurement of mitochondrial function in human blood cells – as well as temporary cryopreservation (Karabatsiakis 2014 Transl Psychiatry) – has become an attractive and by far less invasive alternative for mitochondrial diagnostics. Mitochondrial function of blood cells was linked with numerous diseases and metabolic conditions such as sepsis, neurodegenerative diseases, depression, hypertension, amyotrophic lateral sclerosis, and early-stage heart failure (e.g. Sjoevall 2013 Crit Care; Karabatsiakis 2014 Transl Psychiatry; Hagl 2014 J Alzheimer Dis). The use of human blood cells will thus predictably widen the applicability of respirometry in human physiology and will provide a significant stimulus for the entire field of mitochondrial medicine.
- A key towards achieving comparability among data sets and the applicability of human blood cells for the evaluation of mitochondrial fitness in health and disease is the standardization of the procedures to separate or isolate blood cells, the experimental procedure for the evaluation of mitochondrial respiratory characteristics, and the format for reporting. A consensus on protocols should be reached in WG4, calling for a Workshop right at the start of the COST Action. Depending on the WG4 participants input, cell lines will be defined for which harmonization of datasets should be achieved (Fig. 2).
WG4 Participants
Country | City | Contact |
---|---|---|
Armenia | Yerevan | Trchounian K |
Austria | Innsbruck | Torres-Quesada Omar |
Austria | Innsbruck | Garcia-Souza Luiz F |
Austria | Innsbruck | Doerrier Carolina |
Austria | Innsbruck | Karabatsiakis Alexander |
Austria | Innsbruck | Cardoso Luiza HD |
Austria | Innsbruck | Hoppel Florian |
Austria | Innsbruck | Gnaiger Erich |
Austria | Innsbruck | Fischer Christine |
Austria | Innsbruck | Meszaros Andras T |
Belgium | Liege | Votion Dominique-Marie |
Belgium | Namur | Renard P |
Belgium | Namur | Detraux Damien |
Belgium | Leuven | Bird Matthew |
Belgium | Namur | Arnould Thierry |
Bosnia and Herzegovina | Tuzla | Jusic Amela |
Bosnia and Herzegovina | Tuzla | Hajrulahovic Anesa |
Brazil | Sao Paulo | Dominguez-Amorocho OA |
Brazil | Sao Paulo | Alencar Mayke Bezerra |
Brazil | São Paulo | Crispim Marcell |
Brazil | Sao Paulo | Verdaguer Ignasi Bofill |
Croatia | Zagreb | Rubelj Ivica |
Czech Republic | Prague | Hansikova Hana |
Czech Republic | Pilsen | Markova Michaela |
Czech Republic | Pilsen | Kripnerova M |
Czech Republic | Prague | Fisar Zdenek |
Czech Republic | Pilsen | Kuncova J |
Czech Republic | Prague 4 | Bajzikova Martina |
Czech Republic | Prague | Elkalaf Moustafa |
Czech Republic | Prague | Pecina Petr |
Czech Republic | Hradec Kralove | Vernerova Andrea |
Czech Republic | Hradec Kralove | Maseko Tumisang Edward |
Czech Republic | Prague | Mracek Tomas |
Czech Republic | Vestec | Zobalova Renata |
Czech Republic and Australia | Prague and Southport | Neuzil Jiri |
Czech rep | Hradec Kralove | Falaye T |
Denmark | Malov | Hey-Mogensen M |
Denmark | Hvidovre | Nehlin Jan O |
Denmark | Aarhus | Rattan Suresh IS |
Denmark | Copenhagen N | Mortensen OH |
Denmark | Copenhagen | Rasmussen LJ |
Denmark | Copenhagen | Desler C |
Egypt | Cairo | Abdel-Rahman Engy Ali |
Egypt | Cairo | Ali Sameh S |
Estonia | Tartu | Grellier T |
Estonia | Tallinn | Klepinina Lyudmila |
Estonia | Tallinn | Truu Laura |
Finland | Turku | Stier Antoine |
Finland | Helsinki | Pirinen E |
Finland | Jyvaeskylae | Lehti Maarit |
France | Bordeaux cedex | Mourier A |
France | Paris | Petit Patrice X |
France | Bron | Rizwan Alam M |
Germany | Gießen | Silaidos Carmina |
Germany | Düsseldorf | Prigione Alessandro |
Germany | Munich | Jastroch M |
Germany | Freising | Fromme Tobias |
Germany | Biberach an der Riß | Nold V |
Germany | Hamburg | Singer Dominique |
Germany | Mainz | Vujacic-Mirski Ksenija |
Germany | Freising | Schoettl T |
Germany | Duesseldorf | Eckers A |
Germany | Ulm | Schaefer PM |
Germany | Ulm | Calzia Enrico |
Germany | Magdeburg | Vieira Ligo Teixeira Camila |
Germany | Mainz | Kalinovic S |
Germany | Freising-Weihenstephan | Musiol Eva |
Germany | Ulm | Hartmann C |
Germany | Freising | Klingenspor Martin |
Germany | Leipzig | Ost Mario |
Germany | Regensburg | Renner-Sattler Kathrin |
Germany | Neuherberg | Borchard Sabine |
Germany | Duesseldorf | Piel Sarah |
Germany | Freising | Keppner Gloria |
Germany | Ulm | Kolassa Iris |
Germany | Giessen | Eckert Gunter P |
Greece | Athens | Trougakos Ioannis P |
Hungary | Budapest | Tretter Laszlo |
Hungary | Budapest | Komlodi Timea |
Hungary | Debrecen | Verebne Tar K |
Ireland | Dublin | Karavyraki Marilena |
Ireland | Dublin | Porter Richard K |
Ireland | Sligo | Murphy J |
Israel | Rishon Le Zion | Hachmo Yafit |
Israel | Zrifin | Sova Marina |
Israel | Jerusalem | Saada Reisch Ann |
Italy | Bologna | Paterlini S |
Italy | Bolzano/Bozen | Volani Chiara |
Italy | Ancona | Battino Maurizio |
Italy | Bologna | Porcelli AM |
Italy | Rome | Scatena Roberto |
Italy | Bologna | Gasparre G |
Italy | Milano | Bottoni P |
Italy | Verona | Calabria Elisa |
Italy | Padova | Fernandez-Vizarra Erika |
Italy | Bologna | Genova Maria Luisa |
Italy | Bolzano | Pichler Irene |
Italy | Bolzano | Castelo Rueda Maria Paulina |
Japan | Sapporo | Shirakawa R |
Latvia | Riga | Makarova Elina |
Latvia | Riga | Kidere Dita |
Malaysia | Kuala Lumpur | Abdul Karim Norwahidah |
Malta | Msida | Vella Joanna |
Netherlands | Wageningen | Keijer Jaap |
Netherlands | Groningen | Rots MG |
Netherlands | Nijmegen | Koopman Werner JH |
Norway | Oslo | Lund Jenny |
Norway | Oslo | Nikolic N |
Norway | Oslo | Rustan AC |
Norway | Bergen | Tronstad Karl Johan |
Norway | Oslo | Eide L |
Palestine | Ramallah | Stiban Johnny |
Poland | Warsaw | Dymkowska Dorota |
Poland | Poznań | Ludziejewska A |
Poland | Poznan | Swiniuch Daria |
Poland | Lodz | Watala Cezary |
Poland | Warsaw | Kampa Rafal Pawel |
Poland | Warsaw | Sek Aleksandra |
Poland | Lodz | Labieniec-Watala Magdalena |
Poland | Poznan | Rybacka-Mossakowska Joanna |
Poland | Lodz | Siewiera Karolina |
Poland | Warsaw | Wasilewski M |
Poland | Krakow | Kaczara P |
Poland | Poznan | Michalak Slawomir |
Portugal | Porto | Carrageta D |
Portugal | Porto | Magalhaes Jose |
Portugal | Coimbra | Palmeira Carlos |
Portugal | Porto | Martins Ana Dias |
Portugal | Porto | Crisostomo Luis |
Portugal | Porto | Moreira Bruno P |
Portugal | Cantanhede | Bento Guida Jose Freitas |
Portugal | Porto | Oliveira Pedro Fontes |
Portugal | Covilhã | Dias Tania R |
Portugal | Coimbra | Carvalho Eugenia |
Portugal | Coimbra | Pereira Susana P |
Portugal | Porto | Bernardino RL |
Portugal | Porto | Alves Marco G |
Portugal | Cantanhede | Pinho Sonia A |
Portugal | Porto | Beleza Jorge |
Portugal | Catanhede | Pereira da Silva Grilo da Silva Filomena |
Republic of Korea | Daejeon | Park SH |
Republic of Korea | Yuseong-gu Daejeon | Quang Don T |
Republic of Serbia | Belgrade | Krako Jakovljevic Nina |
Republic of Serbia | Belgrade | Pavlovic Kasja |
Romania | Timisoara | Betiu AM |
Romania | Timisoara | Avram Vlad F |
Romania | Timisoara | Muntean Danina M |
Romania | Timisoara | Lighezan R |
Romania | Timisoara | Danila Maria-Daniela |
Romania | Timisoara | Lelcu Theia |
Russia | Moscow | Krylova T |
Russia | Moscow | Itkis YS |
Russia | Moscow | Tsygankova P |
Saudi Arabia | Giza | Kotb IA |
Serbia | Belgrad | Markovic Ivanka |
Serbia | Belgrade | Misirlic-Dencic S |
Serbia | Belgrade | Ivanovic Tijana |
Serbia | Belgrade | Jeremic M |
Serbia | Belgrade | Isakovic A |
Serbia | Belgrade | Vukojevic M |
Slovakia | Bratislava | Ukropec J |
Slovakia | Košice | Cizmarova Beata |
Slovakia | Bratislava | Ukropcova B |
Slovakia | Bratislava | Sumbalova Zuzana |
Slovakia | Bratislava | Maderova D |
Slovakia | Bratislava | Nemec Michal |
Slovenia | Ljubljana | Pirkmajer Sergej |
Slovenia | Ljubljana | Mars T |
Slovenia | Ljubljana | Kopitar-Jerala Natasa |
Spain | Armilla (Granada) | Fernandez-Ortiz Marisol |
Spain | Barcelona | Smolders V |
Spain | Barcelona | Gil J |
Spain | Madrid | Cadenas S |
Spain | Valencia | Victor Victor Manuel |
Spain | Ourense | Reboredo-Rodriguez Patricia |
Spain | Lleida | Gonzalo Hugo |
Spain | Barcelona | Gonzalez Casacuberta I |
Spain | Valencia | Casado Pinna Marta |
Spain | Granada | Quiles JL |
Spain | Valencia | Borras Consuelo |
Spain | Lleida | Nogueras L |
Spain | Barcelona | Juarez D |
Spain | A Coruña | Mayan MD |
Spain | Barcelona | Dahdah Norma Ramon |
Spain | Barcelona | Zorzano Antonio |
Spain | Madrid | De los Rios C |
Spain | Valencia | Fuertes Agudo Marina |
Spain | Barcelona | Gama Perez Pau |
Spain | Sevilla | Muntane Jordi |
Spain | Armilla, Granada | Escames Germaine |
Spain | Madrid | Cano-Abad MF |
Spain | Sevilla | Bustos Matilde |
Spain | Salamanca | Almeida Angeles |
Spain | A Coruña | Blanco FJ |
Spain | Barcelona | Tura Ceide O |
Spain | Madrid | Monsalve Maria |
Spain | Barcelona | Hyrossova Petra |
Spain | Madrid | Lopez MG |
Spain | Barcelona | Arago Marc |
Sweden | Södertälje | Alfaro-Moreno E |
Sweden | Lund | Westerlund E |
Sweden | Lund | Simon Serrano Sonia |
Sweden | Lund | Karlsson M |
Sweden | Lund | Leffler M |
Sweden | Linköping | Fontes-Oliveira CC |
Sweden | Lund | Elmer Eskil |
Sweden | Lund | Abliva |
Sweden | Lund | Chamkha Imen |
Sweden, SE | Lund | Aasander Frostner Eleonor |
Switzerland | Lausanne | Zanou Nadege |
Switzerland | Geneva | Martinou JC |
The Netherlands | BT Amsterdam | Wuest Rob CI |
Turkey | Ankara | Tuncay Erkan |
Turkey | Istanbul | Baykal AT |
Turkey | Tekirdag | Aral Cenk |
Turkey | Izmir | Aydin HH |
Turkey | Ankara | Engin Ayse Basak |
USA | Fayetteville | Rao RR |
USA | Philadelphia | Kilbaugh Todd |
USA | Iowa City | Buettner Garry R |
USA | Orlando | Coen Paul M |
USA | Baton Rouge | Irving Brian A |
USA | Fayetteville | Iyer Shilpa |
USA | Philadelphia | Starr Jonathan |
USA | St Louis | Welch R |
USA | Philadelphia | Janowska Joanna |
United Kingdom | Leicester | Moisoi Nicoleta |
United Kingdom | Birmingham | Thakker A |
United Kingdom | Stoke-on-Trent | McStay Gavin P |
United Kingdom | Birmingham | Joanisse S |
United Kingdom | Oxford | Makrecka-Kuka Marina |
United Kingdom | Brighton | Moore Anthony L |
Uruguay | Montevideo | Radi R |
WG4 Management
Tasks
- Kick-off meeting to develop a working plan for the establishment of consensus protocols, reporting schemes, and the assignment of specific study tasks.
- Development of SOPs for cell separation.
- Development of laboratory protocols for individual blood cell types (and other cell types) for mitochondrial studies on intact and permeabilized cells.
- Application of SOPs in experimental studies during Short Term Scientific Missions and feeding of data into the MITOEAGLE data repository.
- Publication of SOPs and study results.
Milestones
- Consensus on protocols, reporting schemes and work assignments.
- Completed SOPs for cell preparation & laboratory protocols.
- Application study finished and data transmitted to MITOEAGLE data repository.
- Publication finished.
Deliverables
- SOPs for blood cell separation and respirometric characterisation open for the research community.
- MITOEAGLE data repository for comparative data evaluation, planning of future studies, data mining.
- Publication with a set of reference data.
Feedback WG4
- Dr. Ali will work within the realms of WG4 (blood and cultured cells) and potentially WG1 (protocol development) as well as WG5 (dissemination and training). He will participate in data generation, quality control, and repository efforts of protocols recommended by these working groups. Dr. Ali will contribute to training workshops and conferences that aim at defining standard procedures and terminology in the field of mitochondria physiology. - Sameh S Ali (2016).
- I am very interested in being part of the management committee either as a MC member for managment tasks or in working group 4 MITOEAGLE data repository for blood cells and cultured cells. I have experience in analyzing mitochondrial function in different human tissues as cultured cells and blood cells (also subsets of specific blood populations, see list of publications), muscle and isolated mitochondria. This together with my experience in organizing summer schools and conferences could be helpful as MC member taking care of management tasks. However, if you think my expertise is more helpful in working group 4, I am looking forward to support this working group. - Kathrin Renner-Sattler (2016).